#!/usr/bin/env python import atexit import os import sys import readline import rlcompleter historyPath = os.path.expanduser("~/.pyhistory") def save_history(historyPath=historyPath): import readline readline.write_history_file(historyPath) if os.path.exists(historyPath): readline.read_history_file(historyPath) atexit.register(save_history) del os, atexit, readline, rlcompleter, save_history, historyPath import sys import pickle from itertools import combinations import numpy as np THREE_NODE_TRIANGLE = 2 class point(object): def __init__(self, xyz): self.index = index self.xyz = xyz self.faces = [] def __getitem__(self, i): if isinstance(i, int): if i == 0: return self.xyz[0] elif i == 1: return self.xyz[1] elif i == 2: return self.xyz[2] else: raise IndexError("there are only (x,y,z)") else: raise TypeError("only point.x and point[0] access allowed") def _getx(self): return self.xyz[0] x = property(_getx) def _gety(self): return self.xyz[1] y = property(_gety) def _getz(self): return self.xyz[2] z = property(_getz) def __str__(self): return '%s' % self.xyz __repr__ = __str__ class face(object): def __init__(self): self.neighbors = [] self.points = [] if __name__ == '__main__': if len(sys.argv) != 2: print >> sys.stderr, "usage: %s " % sys.argv[0] sys.exit(1) gmsh_file = open(sys.argv[1], 'r') gmsh_file.readline() # $MeshFormat format = gmsh_file.readline() gmsh_file.readline() # $EndMeshFormat gmsh_file.readline() # $Nodes node_count = int(gmsh_file.readline()) points = [] nppoints = np.zeros((node_count, 3)) for i in xrange(node_count): cur_line = gmsh_file.readline() (index, x,y,z) = cur_line.split() index = int(index) - 1 x = float(x) y = float(y) z = float(z) nppoints[i][0] = x nppoints[i][1] = y nppoints[i][2] = z points.append(point(nppoints[i])) gmsh_file.readline() # $EndNodes gmsh_file.readline() # $Elements element_count = int(gmsh_file.readline()) faceobjs = {} neighbors = {} for i in xrange(element_count): cur_line = gmsh_file.readline() cur_line = cur_line.split() cur_face_index, node_type, rest = (int(cur_line[0]), int(cur_line[1]), [int(j) for j in cur_line[2:]]) if(node_type == THREE_NODE_TRIANGLE): points_for_cur_face = [i-1 for i in rest[rest[0]+1:]] cur_face = face() for cur_point in points_for_cur_face: points[cur_point].faces.append(cur_face_index) cur_face.points = points_for_cur_face faceobjs[cur_face_index] = cur_face edges = [tuple(sorted(i)) for i in combinations(points_for_cur_face, 2)] # edge is two points for edge in edges: if edge in neighbors: neighbors[edge].append(cur_face_index) else: neighbors[edge] = [cur_face_index] for k,v in neighbors.iteritems(): if len(v) > 1: faceobjs[v[0]].neighbors.append(v[1]) faceobjs[v[1]].neighbors.append(v[0]) pickle.dump([(p[0], p[1], p[2]) for p in points], open('/tmp/points.p', 'w')) pickle.dump([f.points for f in faceobjs.itervalues()], open('/tmp/faces.p', 'w'))