made a simplex class, going to move this into the face class to simplify
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@ -1,28 +0,0 @@
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#!/usr/bin/python
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import sys
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import pickle
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from grid import simple_rect_grid, simple_random_grid
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pfile = '/tmp/grid_random.p'
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qfile = '/tmp/grid_random.txt'
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MAX_POINTS = 200
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if __name__ == '__main__':
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sys.setrecursionlimit(4096)
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print sys.getrecursionlimit()
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try:
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total_points = int(sys.argv[1])
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except:
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total_points = 10
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if total_points > MAX_POINTS:
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print "too many points"
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sys.exit(1)
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g = simple_random_grid(total_points)
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g.construct_connectivity()
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print g
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open(qfile, 'w').write(g.for_qhull())
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pickle.dump(g, open(pfile, 'w'))
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@ -5,7 +5,6 @@ import pickle
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from grid import simple_rect_grid, simple_random_grid
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from grid import simple_rect_grid, simple_random_grid
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pfile = '/tmp/grid_regular.p'
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qfile = '/tmp/grid_regular.txt'
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qfile = '/tmp/grid_regular.txt'
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if __name__ == '__main__':
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if __name__ == '__main__':
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@ -17,6 +16,6 @@ if __name__ == '__main__':
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resolution = 3
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resolution = 3
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g = simple_rect_grid(resolution, resolution)
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g = simple_rect_grid(resolution, resolution)
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g.construct_connectivity()
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print g
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print g.get_points_conn([0.4, 0])
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open(qfile, 'w').write(g.for_qhull())
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open(qfile, 'w').write(g.for_qhull())
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pickle.dump(g, open(pfile, 'w'))
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38
lib/grid.py
38
lib/grid.py
@ -7,7 +7,7 @@ from collections import defaultdict
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import numpy as np
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import numpy as np
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import scipy.spatial
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import scipy.spatial
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from baker import run_baker
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from baker import run_baker, get_phis
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from tools import exact_func
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from tools import exact_func
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from smcqdelaunay import *
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from smcqdelaunay import *
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@ -32,6 +32,28 @@ class face(object):
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", ".join(neighbors)
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", ".join(neighbors)
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)
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)
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class simplex(object):
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def __init__(self, points):
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self.R = points
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def contains(self, X):
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phis = get_phis(X, self.R)
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r = True
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if [i for i in phis if i < 0.0]:
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r = False
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return r
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def __str__(self):
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print type(self.R)
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return "simplex: %d: [%s]" % (len(self.R), ", ".join([str(i) for i in self.R]),)
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class grid(object):
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class grid(object):
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facet_re = re.compile(r'''
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facet_re = re.compile(r'''
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-\s+(?P<facet>f\d+).*?
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-\s+(?P<facet>f\d+).*?
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@ -89,6 +111,20 @@ class grid(object):
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(R, S) = self.get_simplex_and_nearest_points(X)
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(R, S) = self.get_simplex_and_nearest_points(X)
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return run_baker(X, R, S)
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return run_baker(X, R, S)
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def get_points_conn(self, X):
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if not self.faces:
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self.construct_connectivity()
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(dist, indicies) = self.tree.query(X, 3)
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print dist, indicies, [(self.points[i][0], self.points[i][1]) for i in indicies]
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print [i.name for i in self.facets_for_point[indicies[0]]]
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print self.facets_for_point[indicies[0]]
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smplx = simplex([self.points[i] for i in indicies])
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if not smplx.contains(X):
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raise AssertionError('simplex should contain point')
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def construct_connectivity(self):
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def construct_connectivity(self):
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"""
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"""
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a call to this method prepares the internal connectivity structure.
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a call to this method prepares the internal connectivity structure.
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